Protein Information

Protein ZmGBP20
ZmGBP20 is a protein in the GeBP family.
Information
TF Name:	ZmGBP20
Species:	Maize
TF Family:	GeBP
Gene Name(Synonym):	GBPTF20
Uniprot ID:	K7UTP1
Subgenome:	2

Overview of domains present in v5 transcripts
	PF04504
Zm00001eb176440_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d049991	DAPseq	sequence	fimo	position
Zm00001d049991	DAPseq	sequence	fimo	position
Zm00001d049991	ChIPseq	sequence	fimo	position
Zm00001d049991	PChIPseq	sequence	fimo	position

Zm00001eb176440_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MALKRSAAAASLGSASDASDGEAGAARNSHRRRVSPSRSRSESPRPNLGPSAAASDTNRERSPRDHLDSDADSDADAGAG
AGRGARSSRLLGERSPSFHSNSDADVAGRSPSPRRNRERTLHLHSDSDSDNSTTAAAAASDDAGDASPLAIAHRASHIGT
SNVKPVSTRPMDVPSRAAAGSSQRRSKRRPSPHSPEHQKRPPRVWSPEDEVTILSALIEFRAKKGRLPASIQDTSKVHSQ
IIHQLTANASTAQLSDKVRRLKHKYKLLLTRSKNGRDPDLPTKHDRDVYQLSKKVWGLKSLLLVRGSRVSHEDTEDAEES
NEEQEIEESDEDIENGWGLRGRTGKKPRALTFENGNGNAIVTAGRACHGDGSGRDDAEKGKQMYPYLWEAVEELSKEHPS
GPIFRKAFGVLEKSKAGAVEEKLRKFRMLEIRQQLRRMDLMKETVGLVLDALEGAY

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF04504
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Nucleotide Sequence
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CTTCCGCAACCGAACATGCCACCGC...

GRMZM2G423292_T01 from maize genome v3

Related TFome: pUT6116

Amino Acid Sequence
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MALKRSAAAASLGSASDASDGEAGAARNSHRRRVSPSRSRSESPRPNLGPSAAASDTNRERSPRDHLDSDADSDADAGAG
AGRGARSSRLLGERSPSFHSNSDADVAGRSPSPRRNRERTLHLHSDSDSDNSTTAAAAASDDAGDASPLAIAHRASHIGT
SNVKPVSTRPMDVPSRAAAGSSQRRSKRRPSPHSPEHQKRPPRVWSPEDEVTILSALIEFRAKKGRLPASIQDTSKVHSQ
IIHQLTANASTAQLSDKVRRLKHKYKLLLTRSKNGRDPDLPTKHDRDVYQLSKKVWGLKSLLLVRGSRVSHEDTEDAEES
NEEQEIEESDEDIENGWGLRGRTGKKPRALTFENGNGNAIVTAGRACHGDGSGRDDAEKGKQMYPYLWEAVEELSKEHPS
GPIFRKAFGVLEKSKAGAVEEKLRKFRMLEIRQQLRRMDLMKETVGLVLDALEGAY

Nucleotide Sequence
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TATAATTGTGCAATTTTTTTTCTCT...

TATAATTGTGCAATTTTTTTTCTCTCTCCAGTGAACACTTCCGCAACCGAACATGCCACCGCCCAGGGGATCCACCCGCCCAGCTCTCCCACAGGCCACAGCCATCGCAACAGAGCAACATGCCAACAGCCATATTGGCGAGGCGGAGCAATCCCGTAGTGGGATTGAAATCCAAAACCCTAAACTAACTCCAATCCACACTTGCCGGCATGGCCCTCAAGCGCTCGGCCGCCGCCGCCAGCCTGGGGTCGGCGTCCGACGCCTCCGACGGCGAAGCGGGCGCGGCCCGCAACAGCCACCGCCGCCGAGTCTCCCCGTCCCGCTCCCGATCCGAGTCCCCTCGGCCCAACCTCGGCCCTAGCGCCGCCGCTTCCGACACCAACCGTGAGCGTTCCCCCCGCGACCACCTCGACTCCGATGCGGACTCCGACGCCGACGCCGGCGCCGGCGCCGGCCGCGGCGCCCGTTCCTCGAGGCTTCTCGGCGAACGTTCCCCGAGCTTCCACTCCAACTCGGACGCTGACGTCGCCGGGCGCTCTCCGTCGCCGAGGCGCAACCGCGAGCGCACCCTTCACCTCCACTCTGACTCCGACTCCGACAACTCCACCACGGCCGCGGCCGCCGCCTCCGATGACGCCGGCGACGCCTCGCCTTTGGCTATTGCGCACCGTGCCTCGCACATCGGGACCTCCAACGTCAAACCCGTCAGCACGCGCCCGATGGATGTGCCCTCGCGCGCCGCCGCGGGATCTTCCCAACGTCGTTCCAAGCGCCGCCCCAGCCCCCACTCCCCGGAGCACCAGAAGCGGCCGCCCCGGGTTTGGAGTCCTGAAGACGAGGTGACCATACTGAGTGCTCTCATTGAGTTCCGTGCCAAAAAAGGTCGGCTTCCTGCGTCCATTCAGGACACGAGCAAGGTACACAGCCAGATTATTCATCAACTCACTGCTAATGCTTCTACGGCTCAGCTTAGTGATAAGGTCAGGCGCCTCAAGCACAAGTACAAGTTGCTGCTCACTCGTTCAAAGAATGGACGGGATCCTGATTTGCCAACCAAACATGATCGCGATGTCTATCAACTTAGCAAGAAAGTTTGGGGATTGAAAAGTCTACTACTAGTACGAGGATCTCGTGTGTCACACGAGGACACTGAAGATGCAGAAGAGAGCAATGAAGAGCAGGAGATAGAGGAGAGTGATGAGGATATAGAAAATGGATGGGGACTCCGTGGTCGCACAGGCAAGAAACCAAGGGCATTGACATTTGAAAATGGCAATGGTAATGCAATTGTCACTGCAGGTAGGGCTTGCCATGGTGATGGCAGTGGGAGAGATGATGCTGAGAAGGGAAAACAAATGTACCCATACCTGTGGGAGGCTGTTGAGGAGCTTTCGAAGGAGCATCCGAGTGGACCTATATTCAGGAAGGCATTTGGTGTACTTGAAAAATCAAAGGCAGGAGCGGTGGAGGAGAAGCTCAGGAAGTTCAGAATGTTAGAGATCAGGCAGCAGCTGCGTCGGATGGACCTGATGAAGGAGACAGTGGGGTTGGTGCTTGATGCTCTGGAGGGTGCATATTGATGTGCTGGTGGTTTTGGATTGTGTCCGGTATTGGTAAGGTGTTGCTCAAAAAGGGCGACCTAAGTCTTCCAGTTGCCTGGAATTGCAGTGTTATGGACATATGGTTGGGTGTGTCTAATTTTGTTGTGAAGGATATGATATGTCTTTGACCCCAACTAGACCTAGATCAAGGAGTTATGACGGCTGCTTGTTGTCGTTCCTGAAATATTTATGCTCTATGTGCTTAGGTGCTAACTTATGTCTATTTGTCATGCCATCCCTATGTTTCTGCTTAATGTTAGTTACTTCATTGGCTTAATTATCTGTTTCTATTTTCCATTTACTGCATCTGTAAATATGAACATCGCCATTTCATCAGGGTTTAATCCAGCTTGATATTTGTTACCTCTCAACTGGATGAACTGGATGCAAGCTTGGTGCTTGTTAGGTTCTTCTAACAAGACTCGCGACTGGGAAATGTAATATGATGTGTTCATAGTTATTTGCGCTTGATGATCTGTATATCACGGTGCTGTCTTTGTATGCCGTG

Zm00001d049991_T001 from maize genome v4

Amino Acid Sequence
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MALKRSAAAASLGSASDASDGEAGAARNSHRRRVSPSRSRSESPRPNLGPSAAASDTNRERSPRDHLDSDADSDADAGAG
AGRGARSSRLLGERSPSFHSNSDADVAGRSPSPRRNRERTLHLHSDSDSDNSTTAAAAASDDAGDASPLAIAHRASHIGT
SNVKPVSTRPMDVPSRAAAGSSQRRSKRRPSPHSPEHQKRPPRVWSPEDEVTILSALIEFRAKKGRLPASIQDTSKVHSQ
IIHQLTANASTAQLSDKVRRLKHKYKLLLTRSKNGRDPDLPTKHDRDVYQLSKKVWGLKSLLLVRGSRVSHEDTEDAEES
NEEQEIEESDEDIENGWGLRGRTGKKPRALTFENGNGNAIVTAGRACHGDGSGRDDAEKGKQMYPYLWEAVEELSKEHPS
GPIFRKAFGVLEKSKAGAVEEKLRKFRMLEIRQQLRRMDLMKETVGLVLDALEGAY

Nucleotide Sequence
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ATGGCCCTCAAGCGCTCGGCCGCCG...

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Protein ZmGBP20

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmGBP20 is the regulator

Interactions where ZmGBP20 is the target
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Zm00001eb176440_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G423292_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d049991_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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